Structure of PDB 3j9z Chain LU

Receptor sequence

>3j9zLU (length=84) Species: 562 (Escherichia coli) [Search protein sequence]

AHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANV
GCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE

3D structure

PDB

3j9z Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G.

Chain

Resolution

3.6 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	LU	H2 K4 G7 R10 N11 R13 D14 S15 K18 R19 L20 G21 R24 F25 E28 S29 V30 L31 A32 R38 Q39 R40 K43 G53 R54 D55 F59 K61 F68 R76 K77	H2 K4 G7 R10 N11 R13 D14 S15 K18 R19 L20 G21 R24 F25 E28 S29 V30 L31 A32 R38 Q39 R40 K43 G53 R54 D55 F59 K61 F68 R76 K77
BS02	rna	LU	K71 G72 P73 N75	K71 G72 P73 N75

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0019843	rRNA binding
GO:0043022	ribosome binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0001558	regulation of cell growth
GO:0002181	cytoplasmic translation
GO:0006412	translation
GO:0042256	cytosolic ribosome assembly
GO:0090070	positive regulation of ribosome biogenesis
GO:1902626	assembly of large subunit precursor of preribosome

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:3j9z, PDBe:3j9z, PDBj:3j9z
PDBsum	3j9z
PubMed	26229983
UniProt	P0A7L8\|RL27_ECOLI Large ribosomal subunit protein bL27 (Gene Name=rpmA)