Structure of PDB 7qca Chain LT0

Receptor sequence
>7qcaLT0 (length=156) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]
VSSHGYRRQTRNLFSQAFRKHGMPNTSTYLTQYAVGEYVDIKVNPAIHKG
MPHKYYHGRTGIIKEVNRGSVIVLFNRILANKTVERKVIVGIEHIRKSKC
QDEYLKRLEINKKIIEEAEKKGEVPVLFKRQPKGPKPAVEMLMNNIIELS
YDKVES
3D structure
PDB7qca Spraguea lophii ribosome
ChainLT0
Resolution2.79 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LT0 S4 H5 G6 Y7 R8 R9 Q10 R12 S16 Q17 G23 H49 H54 K55 T61 R69 A81 N82 K83 R87 K88 Q102 Y105 R108 N112 K130 R131 S3 H4 G5 Y6 R7 R8 Q9 R11 S15 Q16 G22 H48 H53 K54 T60 R68 A80 N81 K82 R86 K87 Q101 Y104 R107 N111 K129 R130
BS02 rna LT0 N26 T27 S28 N25 T26 S27
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7qca, PDBe:7qca, PDBj:7qca
PDBsum7qca
PubMed
UniProtS7W8F6

[Back to BioLiP]