Structure of PDB 8pv4 Chain LT

Receptor sequence
>8pv4LT (length=129) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
RTYRVGDIVDIKVNGAVQKGMPHKFYHGKTGVVYNVTKSAVGVIVYKRVK
HRYIEKRINVRIEHVKPSRSREDFLRRVKENAELKKKAKAEGVPVQLKRQ
PAMPREAHTVSIADNKPVTLAPVAYETTI
3D structure
PDB8pv4 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainLT
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LT R35 D41 K43 H58 G59 T61 K69 S70 R79 K81 H82 R100 S101 D104 F105 V109 N112 K116 A119 K120 V124 P125 V126 K129 R130 R4 D10 K12 H27 G28 T30 K38 S39 R48 K50 H51 R69 S70 D73 F74 V78 N81 K85 A88 K89 V93 P94 V95 K98 R99
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8pv4, PDBe:8pv4, PDBj:8pv4
PDBsum8pv4
PubMed37921038
UniProtG0S0Z3

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