Structure of PDB 8p5d Chain LQ0

Receptor sequence
>8p5dLQ0 (length=182) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]
MLKQKMFEHYKKKAILFDESRVPRTKNVFYQSLFSLYKKVCENTENEIVH
KITKRLTMSRTERHPLKLSNIIEQANGKEIVVFVGKVLDDDKILEIPKIT
IVALKISKQAKEKLTLNGGEFYTLDKLFYISKDLKDVALVKGDKNNRKCT
RYFGASGDKGSETYPRTRKGARRGERRIKNKK
3D structure
PDB8p5d Spraguea lophii ribosome
ChainLQ0
Resolution10.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LQ0 K3 F7 Y10 K13 T25 M58 S59 R60 K86 L88 D89 S107 K108 K141 N146 R147 K148 R151 F153 R168 G170 R172 R173 K182 K3 F7 Y10 K13 T25 M58 S59 R60 K86 L88 D89 S107 K108 K141 N146 R147 K148 R151 F153 R168 G170 R172 R173 K182
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8p5d, PDBe:8p5d, PDBj:8p5d
PDBsum8p5d
PubMed37709902
UniProtS7WAI2

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