Structure of PDB 8p5d Chain LPP

Receptor sequence
>8p5dLPP (length=87) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]
SRKTKKVGITGKYGSRYGSSLKRRAMICMNAQSKRYCCSFCGKTTVKREV
IGIWSCRFCGKKVSGGAYVPITNQQVEYKQVINRMKM
3D structure
PDB8p5d Spraguea lophii ribosome
ChainLPP
Resolution10.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LPP S2 R3 K4 T5 K6 V8 G9 G12 K13 S16 R17 Y18 G19 S20 S21 R36 K44 R49 V51 S1 R2 K3 T4 K5 V7 G8 G11 K12 S15 R16 Y17 G18 S19 S20 R35 K43 R48 V50
BS02 ZN LPP C39 C42 C57 C60 C38 C41 C56 C59
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:8p5d, PDBe:8p5d, PDBj:8p5d
PDBsum8p5d
PubMed37709902
UniProtS7W6N9

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