Structure of PDB 7old Chain LP

Receptor sequence

>7oldLP (length=174) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]

VRYAATEIAPTKSARARGSYLRVSFKNTRETAQAINGWKLQRALTFLQNV
IDKKEAVPMRRYAGSTGRTAQGKQWGVSRARWPVKSAQFLIGLLKNAEAN
ADAKGLDTGNLIIKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILT
EAEVESHLSSRQRGVRIRRALTAA

3D structure

PDB

7old High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.

Chain

Resolution

3.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	LP	R3 R16 Y21 R23 S25 K27 Q34 R43 R62 Y63 G65 S66 T67 G68 R69 A71 Q72 K74 Q75 R80 R82 W83 N97 N101 Q118 R127 Y130 R131 A132 H133 G134 I136 N137 P138 Y139 M140 S141 H170 S173 R174 R181 T185	R2 R15 Y20 R22 S24 K26 Q33 R42 R61 Y62 G64 S65 T66 G67 R68 A70 Q71 K73 Q74 R79 R81 W82 N96 N100 Q117 R126 Y129 R130 A131 H132 G133 I135 N136 P137 Y138 M139 S140 H157 S160 R161 R168 T172
BS02	rna	LP	R3 A5 R61 R62	R2 A4 R60 R61

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015934	large ribosomal subunit
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:7old, PDBe:7old, PDBj:7old
PDBsum	7old
PubMed	35079002
UniProt	G0SGY1

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