Structure of PDB 5wlc Chain LL

Receptor sequence
>5wlcLL (length=475) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence]
SPVLQSAYDPSGQYLCYVTVALDKQRVGVQPTQRWNENFLYLEDSKLKVT
CLKWVNDTVAIILGMNNGEIWLYSVLANEVTYKFTTGNSYEIKDIDLMGN
QLWCIDSSDAFYQFDLLQFKLLQHFRINNCVQLNKLTIVPAGDSVAQLLV
ASHSISLIDIEEKKVVMTFPGHVSPVSTLQVITNEFFISGAEGDRFLNVY
DIHSGMTKCVLVAESDIKELSHSGQADSIAVTTEDGSLEIFVDPLVSGNK
SKKSSKKIQIVSKDGRKVPIYNAFINKDLLNVSWLQNATMPYFKNLQWRE
IPNEYTVEISLNWNNKNKSADRDLHGKDLASATNYVEGNARVTSGDNFKH
VTGTVTVILSQALQSNDHSLLETVLNNRDERVIRDTIFRLKPALAVILLE
RLAERIARQTHRQGPLNVWVKWCLIIHGGYLVSIPNLMSTLSSLHSTLKR
RSDLLPRLLALDARLDCTINKFKTL
3D structure
PDB5wlc The complete structure of the small-subunit processome.
ChainLL
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LL H346 G359 N360 R362 E454 R460 R490 Q491 H493 R494 H325 G338 N339 R341 E372 R378 R408 Q409 H411 R412
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364 rRNA processing
GO:0030490 maturation of SSU-rRNA
GO:0042254 ribosome biogenesis
GO:0045943 positive regulation of transcription by RNA polymerase I
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0032040 small-subunit processome
GO:0033553 rDNA heterochromatin
GO:0034455 t-UTP complex
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5wlc, PDBe:5wlc, PDBj:5wlc
PDBsum5wlc
PubMed28945246
UniProtQ04177|UTP5_YEAST U3 small nucleolar RNA-associated protein 5 (Gene Name=UTP5)

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