Structure of PDB 8pvk Chain LK

Receptor sequence
>8pvkLK (length=158) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
NEIKIIHLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATADWKGLR
VTVRLTIQNRQAQVSVVPTASALIIRALKEPPRDRKKEKNIKHNKSVSLD
EIIEIARTMRFKSFSKDLKGGVKEILGTAFSVGCQVDGKSPKAISDAIEA
GEIDIPDE
3D structure
PDB8pvk Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainLK
Resolution2.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LK R16 T76 S78 K96 N97 H100 M116 K119 S122 K130 E131 G134 T135 F137 S138 K149 R9 T69 S71 K89 N90 H93 M109 K112 S115 K123 E124 G127 T128 F130 S131 K142
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pvk, PDBe:8pvk, PDBj:8pvk
PDBsum8pvk
PubMed37921038
UniProtG0SGH8

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