Structure of PDB 8oj8 Chain LH

Receptor sequence
>8oj8LH (length=190) Species: 9606 (Homo sapiens) [Search protein sequence]
MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGK
KKKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFP
INVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGND
IELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQA
3D structure
PDB8oj8 UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER
ChainLH
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna LH M1 G22 R23 H40 N42 V43 K50 R54 W60 R64 A68 R71 T72 S75 H76 N79 H98 F99 E120 K121 Y122 E152 S155 Q163 K170 D171 R173 K174 M1 G22 R23 H40 N42 V43 K50 R54 W60 R64 A68 R71 T72 S75 H76 N79 H98 F99 E120 K121 Y122 E152 S155 Q163 K170 D171 R173 K174
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8oj8, PDBe:8oj8, PDBj:8oj8
PDBsum8oj8
PubMed38383785
UniProtP32969|RL9_HUMAN Large ribosomal subunit protein uL6 (Gene Name=RPL9)

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