Structure of PDB 8p5d Chain LEE

Receptor sequence

>8p5dLEE (length=135) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]

MDIVNPSLSKVIDIINKGKSKKQFKRFQSWRVKRVSESWRKPRGIDNRMR
RKFGGAPDMPGIGYKKPNAIRFLLPNGYRKIMVACVKDLEALISLNSFYC
AEIRHAVGSKKRIEILERAEELGILVINKEGKLVK

3D structure

PDB

8p5d Spraguea lophii ribosome

Chain

LEE

Resolution

10.8 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	LEE	K25 R26 F27 Q28 R31 K33 R34 S38 W39 R40 G44 I45 D46 N47 R48 R51 K52 P60 G61 I62 G63 Y64 K66 N68 R71 K80 C85 E102 R104 H105 S109 K110 K111 N128 G131 K132	K25 R26 F27 Q28 R31 K33 R34 S38 W39 R40 G44 I45 D46 N47 R48 R51 K52 P60 G61 I62 G63 Y64 K66 N68 R71 K80 C85 E102 R104 H105 S109 K110 K111 N128 G131 K132

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links