Structure of PDB 8vsa Chain L34
Receptor sequence
>8vsaL34 (length=46) Species:
562
(Escherichia coli) [
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MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
3D structure
PDB
8vsa
Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
Chain
L34
Resolution
3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
L34
M1 K2 R3 T4 F5 Q6 P7 S8 V9 L10 K11 R12 N13 R14 H16 F18 R19 R21 K25 N26 V30 R33 R34 K37 G38 R39 L42 T43 S45 K46
M1 K2 R3 T4 F5 Q6 P7 S8 V9 L10 K11 R12 N13 R14 H16 F18 R19 R21 K25 N26 V30 R33 R34 K37 G38 R39 L42 T43 S45 K46
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8vsa
,
PDBe:8vsa
,
PDBj:8vsa
PDBsum
8vsa
PubMed
38500588
UniProt
B7MGC4
|RL34_ECO45 Large ribosomal subunit protein bL34 (Gene Name=rpmH)
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