Structure of PDB 8vsa Chain L14

Receptor sequence
>8vsaL14 (length=122) Species: 562 (Escherichia coli) [Search protein sequence]
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRG
KVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
GPVTRELRSEKFMKIISLAPEV
3D structure
PDB8vsa Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
ChainL14
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L14 M1 Q3 E4 Q5 T6 M7 I22 K23 G27 S28 R30 R31 K40 T42 K44 K54 G55 K66 K67 R70 G74 R78 M1 Q3 E4 Q5 T6 M7 I22 K23 G27 S28 R30 R31 K40 T42 K44 K54 G55 K66 K67 R70 G74 R78
BS02 rna L14 N13 P48 R98 F100 S117 N13 P48 R98 F100 S117
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8vsa, PDBe:8vsa, PDBj:8vsa
PDBsum8vsa
PubMed38500588
UniProtS1NW45

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