Structure of PDB 8vsa Chain L10

Receptor sequence
>8vsaL10 (length=131) Species: 562 (Escherichia coli) [Search protein sequence]
MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGV
YMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFA
KANAKFEVKAAAFEGELIPASQIDRLATLPT
3D structure
PDB8vsa Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
ChainL10
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L10 M1 N4 D29 S30 R31 G32 V33 T34 K37 M38 L41 A44 G45 G49 R53 V54 V55 R56 N57 T58 L59 L60 R61 R62 E65 P79 T80 L81 M1 N4 D29 S30 R31 G32 V33 T34 K37 M38 L41 A44 G45 G49 R53 V54 V55 R56 N57 T58 L59 L60 R61 R62 E65 P79 T80 L81
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0043022 ribosome binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8vsa, PDBe:8vsa, PDBj:8vsa
PDBsum8vsa
PubMed38500588
UniProtP0A7J3|RL10_ECOLI Large ribosomal subunit protein uL10 (Gene Name=rplJ)

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