Structure of PDB 7ls2 Chain L1

Receptor sequence
>7ls2L1 (length=206) Species: 10090 (Mus musculus) [Search protein sequence]
VSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR
LKSTPRPKFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLA
KKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKST
IKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRAL
YIKSTM
3D structure
PDB7ls2 Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance.
ChainL1
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L1 K24 K27 F28 E33 Q35 R60 K98 L99 K102 K105 C164 A166 R202 Y205 T209 M210 K20 K23 F24 E29 Q31 R56 K94 L95 K98 K101 C160 A162 R198 Y201 T205 M206
BS02 rna L1 Q44 K45 R48 K161 Q40 K41 R44 K157
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0140236 translation at presynapse
GO:0140242 translation at postsynapse
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:0045202 synapse
GO:0098793 presynapse
GO:0098794 postsynapse
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ls2, PDBe:7ls2, PDBj:7ls2
PDBsum7ls2
PubMed34815424
UniProtP53026|RL10A_MOUSE Large ribosomal subunit protein uL1 (Gene Name=Rpl10a)

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