Structure of PDB 9ax7 Chain L

Receptor sequence

>9ax7L (length=123) Species: 562 (Escherichia coli)

ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRK
VCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGA
LDCSGVKDRKQARSKYGVKRPKA

3D structure

• PDB: 9ax7 Structural analysis of noncanonical translation initiation complexes.
• Chain: L
• Resolution: 2.63 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	L	A2 N5 Q6 L7 R9 R12 A13 R14 K15 K18 A26 C27 P28 Q29 K30 R31 K43 N46 S47 A48 L49 R50 K51 T58 Y66 G68 G69 E70 L81 R83 G84 K88 X89 R110 K111 Q112 A113 R114 S115 K116 G118 V119 K120 R121	A1 N4 Q5 L6 R8 R11 A12 R13 K14 K17 A25 C26 P27 Q28 K29 R30 K42 N45 S46 A47 L48 R49 K50 T57 Y65 G67 G68 E69 L80 R82 G83 K87 X88 R109 K110 Q111 A112 R113 S114 K115 G117 V118 K119 R120

External links

• PDB: RCSB:9ax7, PDBe:9ax7, PDBj:9ax7
• PDBsum: 9ax7
• PubMed: 39222680
• UniProt: A0A0F1AUC4