Structure of PDB 8vm9 Chain L

Receptor sequence

>8vm9L (length=215) Species: 9606 (Homo sapiens) [Search protein sequence]

SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIY
SASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFG
QGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK
VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQ
GLSSPVTKSFNRGEC

3D structure

PDB

8vm9 The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6

Chain

Resolution

2.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	L	S92 F95	S92 F95
BS02	rna	L	S57 G58 P60 S61 K170	S57 G58 P60 S61 K170

External links

PDB	RCSB:8vm9, PDBe:8vm9, PDBj:8vm9
PDBsum	8vm9
PubMed	39036953

[Back to BioLiP]