Structure of PDB 8tdi Chain L

Receptor sequence
>8tdiL (length=385) Species: 626935 (Collinsella tanakaei) [Search protein sequence]
MEKVRYGIIGVGNQGGAYAGFLTGTCPPHCALGALCDIDPQKEEMCKEKY
PDVPFYKDWKDMVASGDVDAVITTVPHYLHTEIAIYCLEHGMNVLVEKPA
GVYAKSVREMNECAAAHPEVTFGIMFNQRTNKLYQKIREIVASGELGEIR
RSNWIINNWYRPDSYYRLSDWRATWGGEGGGVLVNQAPHQLDLWQWICGI
PTTVYANCINGSHRDIAVENDVTVLTEYENGATGSFITCTHDLLGTDRFE
IDLDGGKIVVEDSKKAYIYRFKETETAVNARDMDWMQIAMLTSDKMFEVE
EFENTDGWGYQHTTVMENFAQHIIDGTPLLAPGSDGINGVRLANAIQLSG
WTGEKVANPVDEDKYLAELNKRIEAEGKFPVREHH
3D structure
PDB8tdi An alternative broad-specificity pathway for glycan breakdown in bacteria
ChainL
Resolution2.6 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NAD L G20 G22 N23 Q24 D57 I58 T94 V95 H97 H100 E117 K118 N147 W191 R192 H209 H338 G10 G12 N13 Q14 D37 I38 T74 V75 H77 H80 E97 K98 N127 W171 R172 H189 H312
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