Structure of PDB 8bim Chain L

Receptor sequence
>8bimL (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB8bim Modulation of translational decoding by m 6 A modification of mRNA.
ChainL
Resolution2.04 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L R10 K17 F92 R94 Y99 R111 F117 R9 K16 F91 R93 Y98 R110 F116
BS02 rna L K3 R15 R25 H29 R30 T31 R33 Q38 G44 S45 V54 K63 Y64 H100 K2 R14 R24 H28 R29 T30 R32 Q37 G43 S44 V53 K62 Y63 H99
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:8bim, PDBe:8bim, PDBj:8bim
PDBsum8bim
PubMed37553384
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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