Structure of PDB 7ekk Chain L

Receptor sequence

>7ekkL (length=212) Species: 9606 (Homo sapiens) [Search protein sequence]

EIVLTQSPGTQSLSPGERATLSCRASQSVGNNKLAWYQQRPGQAPRLLIY
GASSRPSGVADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGQSLSTFG
QGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK
VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQ
GLSSPVTKSFNR

3D structure

PDB

7ekk Focal accumulation of aromaticity at the CDRH3 loop mitigates 4E10 polyreactivity without altering its HIV neutralization profile.

Chain

Resolution

1.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	L	Y91 G92 Q93 S94 S96	Y92 G93 Q94 S95 S97

External links

PDB	RCSB:7ekk, PDBe:7ekk, PDBj:7ekk
PDBsum	7ekk
PubMed	34505005

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