Structure of PDB 6y54 Chain L

Receptor sequence

>6y54L (length=217) Species: 10090 (Mus musculus) [Search protein sequence]

DVVMTQTPLSLPVSLGDQASISCRSSQSLIYSNGNTYLHWYLQKPGQSPK
LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQNTHIP
YTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN
VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCE
ATHKTSTSPIVKSFNRN

3D structure

PDB

6y54 Structure of a protective epitope reveals the importance of acetylation of Neisseria meningitidis serogroup A capsular polysaccharide.

Chain

Resolution

2.67 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	OOW	L	Y31 I99	Y31 I99
BS02	OA8	L	Y31 Y37 H39 N96 Y101	Y31 Y37 H39 N96 Y101
BS03	OAB	L	Y54 K55	Y54 K55

External links

PDB	RCSB:6y54, PDBe:6y54, PDBj:6y54
PDBsum	6y54
PubMed	33158970

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