Structure of PDB 6xuk Chain L

Receptor sequence

>6xukL (length=214) Species: 10090 (Mus musculus) [Search protein sequence]

DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKPPKTLIYR
ANRLVPGVPSRFSGSGSGQDYSLTISSLEYEDMGIYWCLQYDEFPRTWGG
GTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRGEC

3D structure

PDB

6xuk Biomolecular Recognition of the Glycan Neoantigen CA19-9 by Distinct Antibodies.

Chain

Resolution

1.42 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	GAL	L	Y32 R50	Y32 R50
BS02	SIA	L	Y49 R50 Y91	Y49 R50 Y91

External links

PDB	RCSB:6xuk, PDBe:6xuk, PDBj:6xuk
PDBsum	6xuk
PubMed	34119488

[Back to BioLiP]