Structure of PDB 6v7b Chain L

Receptor sequence
>6v7bL (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence]
IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR
3D structure
PDB6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
ChainL
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna L H18 K24 W31 R38 R53 Q56 P72 R83 H9 K15 W22 R29 R44 Q47 P63 R74
BS02 dna L L14 K17 H18 G21 V25 W31 K41 R44 G76 W79 K80 R83 L5 K8 H9 G12 V16 W22 K32 R35 G67 W70 K71 R74
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum6v7b
PubMed32368353
UniProtA0A140F3K6|CAPS1_PFV1 Major capsid protein 1

[Back to BioLiP]