Structure of PDB 6obd Chain L

Receptor sequence

>6obdL (length=216) Species: 10090 (Mus musculus) [Search protein sequence]

DIVMTQTPLSLSVTPGQPASISCKSSQSLLYSNGKTYLNWVLQKPGQSPQ
RLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCVQGSHFH
TFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKV
QWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV
THQGLSSPVTKSFNRG

3D structure

PDB

6obd Engineering an anti-CD52 antibody for enhanced deamidation stability.

Chain

Resolution

2.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	L	Y31 Y37 N39 R51 Y54 G96	Y31 Y37 N39 R51 Y54 G96
BS02	ZN	L	E84 E86	E84 E86
BS03	ZN	L	N141 N142	N141 N142
BS04	OPE	L	N33 K35	N33 K35

External links

PDB	RCSB:6obd, PDBe:6obd, PDBj:6obd
PDBsum	6obd
PubMed	31199181

[Back to BioLiP]