Structure of PDB 5w5t Chain L

Receptor sequence
>5w5tL (length=410) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence]
VQPLARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNAL
NSGIRRIGVATQYKAHSLIRHLQRGWDFFRPERNESFDILPAQTQWYEGT
ADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGC
LEVPRMEATGFGVMHVNEKDEIIDFIEKPADPPGIPGNEGFALASMGIYV
FHTKFLMEALRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSD
FEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAK
FVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVV
LPSVKIGRHAQLSNVVIDHGVVIPEGLIVGEDPELDAKRFRRTESGICLI
TQSMIDKLDL
3D structure
PDB5w5t Structural analysis reveals a pyruvate-binding activator site in theAgrobacterium tumefaciensADP-glucose pyrophosphorylase.
ChainL
Resolution1.76 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.27: glucose-1-phosphate adenylyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 9X7 L K44 T307 S329 G330 K38 T296 S318 G319
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0008878 glucose-1-phosphate adenylyltransferase activity
GO:0016779 nucleotidyltransferase activity
Biological Process
GO:0005978 glycogen biosynthetic process
GO:0009058 biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5w5t, PDBe:5w5t, PDBj:5w5t
PDBsum5w5t
PubMed30401744
UniProtP39669|GLGC_RHIRD Glucose-1-phosphate adenylyltransferase (Gene Name=glgC)

[Back to BioLiP]