Structure of PDB 5m63 Chain L

Receptor sequence

>5m63L (length=215) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

VVLTQTPSSVSAAVGGSVTISCQSSQSLYNNNRLAWYQQKAGQPPKLLIY
KASTLESGVPSRFKGSGAGTQFTLTISDVVCDDAATYYCAGYKSNSDDGT
AFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVT
WEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVT
QGTTSVVQSFNRGDC

3D structure

PDB

5m63 Structure of a protective epitope of group B Streptococcus type III capsular polysaccharide.

Chain

Resolution

2.74 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	SIA	L	Y52 R56	Y29 R33	PDBbind-CN: -logKd/Ki=6.96,Kd=0.11uM

External links

PDB	RCSB:5m63, PDBe:5m63, PDBj:5m63
PDBsum	5m63
PubMed	28439022

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