Structure of PDB 5drz Chain L

Receptor sequence

>5drzL (length=216) Species: 9606 (Homo sapiens) [Search protein sequence]

FLLTQSPDSLAVTLGETATITCRSSRNILHSLNNKNYLAWYQQRPGQAPK
LLVIWASMRVSGVADRFSGSGSGTDFALTISSLQPEDAAVYYCQHYYTTH
RTFGQGTRVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAK
VQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACE
VTHQGLSSPVTKSFNR

3D structure

PDB

5drz Molecular basis for epitope recognition by non-neutralizing anti-gp41 antibody F240.

Chain

Resolution

2.54 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	L	N28 K30 W50 M53	N33 K35 W55 M58
BS02	MG	L	P80 D167 S171	P85 D172 S176

External links

PDB	RCSB:5drz, PDBe:5drz, PDBj:5drz
PDBsum	5drz
PubMed	27827447

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