Structure of PDB 4nja Chain L

Receptor sequence
>4njaL (length=217) Species: 10090 (Mus musculus) [Search protein sequence]
DIVLTQSPASLAVSLGQRATISCRASESVDSYGNSFMHWYQQKPGQPPKL
LIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPR
TFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINV
KWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEA
THKTSTSPIVKSFNRNE
3D structure
PDB4nja Adaptive Mutations Alter Antibody Structure and Dynamics during Affinity Maturation.
ChainL
Resolution2.204 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN L E27 E93 E27 E97
BS02 2M9 L Y28 N30 F32 R50 Y32 N34 F36 R54 PDBbind-CN: -logKd/Ki=6.22,Kd=600nM
Gene Ontology
Biological Process
GO:0002250 adaptive immune response
GO:0006955 immune response
Cellular Component
GO:0005615 extracellular space
GO:0019814 immunoglobulin complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4nja, PDBe:4nja, PDBj:4nja
PDBsum4nja
PubMed25756188
UniProtP01660|KV3A8_MOUSE Ig kappa chain V-III region PC 3741/TEPC 111;
Q52L95

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