Structure of PDB 4lzz Chain L

Receptor sequence
>4lzzL (length=246) Species: 63363 (Aquifex aeolicus) [Search protein sequence]
YVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSK
EPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLD
EIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVK
EGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEG
FTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV
3D structure
PDB4lzz Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis.
ChainL
Resolution3.21 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 08T L E256 R299 E118 R161
BS02 ADP L Y139 V140 S169 G170 V171 G172 K173 E174 V175 V356 R357 Y1 V2 S31 G32 V33 G34 K35 E36 V37 V218 R219
BS03 MG L E174 D238 E36 D100
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0008134 transcription factor binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4lzz, PDBe:4lzz, PDBj:4lzz
PDBsum4lzz
PubMed24240239
UniProtO67198

[Back to BioLiP]