Structure of PDB 4by9 Chain L

Receptor sequence
>4by9L (length=366) Species: 2261 (Pyrococcus furiosus) [Search protein sequence]
FISENVRGIYAFDENGNLIEKRYFTDKPEKVLDQLLKGEITKDLEELLNS
LKEKGYDEFVFEHPELSRRAKELGFSATTEFPNIAGERLRSNPEEFLGEN
WFEEYYKVGVALTRMRIQEQSGARDKMVIQAIEALDDVDKVINLLVARLR
EWYSLHFPELDELLPKHPQYVAFVKTVGHRDNINEEVLRELGLSEEKIKK
ILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVA
PNLKALVGAKLAARLISLAGGLRELAMMPSSTIQVLGAEKALFRHLRTGA
KPPKHGVIYQYPAINRSPWWQRGKIARALAGKLAIAARVDYFSGEYIAEE
LKKELEARIREIKEKY
3D structure
PDB4by9 The Structure of the Box C/D Enzyme Reveals Regulation of RNA Methylation.
ChainL
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L E190 K199 L202 S281 R294 T298 G299 K301 P302 K304 W319 W320 G323 K324 R327 R358 Y366 E190 K199 L202 S281 R294 T298 G299 K301 P302 K304 W319 W320 G323 K324 R327 R358 Y366
BS02 rna L R189 F293 R297 R189 F293 R297
BS03 rna L K290 A291 P303 K304 H305 K290 A291 P303 K304 H305
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0030515 snoRNA binding
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex
GO:0032040 small-subunit processome

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Molecular Function
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Cellular Component
External links
PDB RCSB:4by9, PDBe:4by9, PDBj:4by9
PDBsum4by9
PubMed24121435
UniProtQ8U4M1

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