Structure of PDB 2zjp Chain L

Receptor sequence
>2zjpL (length=104) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSA
ALKSGNKTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAA
REGG
3D structure
PDB2zjp Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin.
ChainL
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L K10 L11 T13 R14 R15 K16 V17 R18 R26 F89 R91 K95 Y96 K3 L4 T6 R7 R8 K9 V10 R11 R19 F82 R84 K88 Y89
BS02 rna L K16 R28 Y32 S34 S35 H37 Y39 Q41 G48 Q49 T50 A57 K64 T65 Y94 K95 H97 G98 R99 K9 R21 Y25 S27 S28 H30 Y32 Q34 G41 Q42 T43 A50 K57 T58 Y87 K88 H90 G91 R92
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:2zjp, PDBe:2zjp, PDBj:2zjp
PDBsum2zjp
PubMed18406324
UniProtQ9RSL2|RL18_DEIRA Large ribosomal subunit protein uL18 (Gene Name=rplR)

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