Structure of PDB 1j5a Chain L

Receptor sequence
>1j5aL (length=130) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
EQTFRNKKQRKQQVKLRKPGFAVAKYVRMSPRKVRLVVDVIRGKSVQDAE
DLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLK
RLIPRARGSANIIKKRTSHITIIVAEKGNK
3D structure
PDB1j5a Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
ChainL
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L K15 R62 S74 P108 G112 A114 K11 R58 S70 P104 G108 A110 PDBbind-CN: Kd=10nM
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1j5a, PDBe:1j5a, PDBj:1j5a
PDBsum1j5a
PubMed11677599
UniProtQ9RXJ7|RL22_DEIRA Large ribosomal subunit protein uL22 (Gene Name=rplV)

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