Structure of PDB 1c9s Chain L

Receptor sequence
>1c9sL (length=70) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
TNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSA
IKVRGKAYIQTRHGVIESEG
3D structure
PDB1c9s Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA.
ChainL
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L G18 F32 H34 S35 E36 K37 D39 R58 G14 F28 H30 S31 E32 K33 D35 R54
BS02 TRP L G23 A46 Q47 T49 T52 G19 A42 Q43 T45 T48
BS03 TRP L R26 G27 D29 T30 S53 R22 G23 D25 T26 S49
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1c9s, PDBe:1c9s, PDBj:1c9s
PDBsum1c9s
PubMed10499579
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

[Back to BioLiP]