Structure of PDB 8rpz Chain K

Receptor sequence
>8rpzK (length=122) Species: 562 (Escherichia coli) [Search protein sequence]
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRG
KVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
GPVTRELRSEKFMKIISLAPEV
3D structure
PDB8rpz Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
ChainK
Resolution2.44 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna K M1 Q3 E4 Q5 T6 M7 K23 S28 H29 R30 R31 Y32 K40 T42 K54 G55 V57 K66 K67 R70 G74 M1 Q3 E4 Q5 T6 M7 K23 S28 H29 R30 R31 Y32 K40 T42 K54 G55 V57 K66 K67 R70 G74
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8rpz, PDBe:8rpz, PDBj:8rpz
PDBsum8rpz
PubMed38730238
UniProtP0ADY3|RL14_ECOLI Large ribosomal subunit protein uL14 (Gene Name=rplN)

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