Structure of PDB 8peg Chain K

Receptor sequence
>8pegK (length=118) Species: 562 (Escherichia coli) [Search protein sequence]
VRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPF
AAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNIT
DVTPIPHNGCRPPKKRRV
3D structure
PDB8peg Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
ChainK
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna K H22 N28 N29 G39 N40 A41 W44 T46 G48 G49 R53 G54 S55 K57 K87 P115 P117 H118 N119 G120 C121 R122 K125 R127 R128 V129 H11 N17 N18 G28 N29 A30 W33 T35 G37 G38 R42 G43 S44 K46 K76 P104 P106 H107 N108 G109 C110 R111 K114 R116 R117 V118
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8peg, PDBe:8peg, PDBj:8peg
PDBsum8peg
PubMed38409277
UniProtP0A7R9|RS11_ECOLI Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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