Structure of PDB 8fjl Chain K

Receptor sequence
>8fjlK (length=1098) Species: 185783 (Golden shiner reovirus) [Search protein sequence]
SYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINNAIRSFLTAWD
GIRILSPDVSSKHLSAYLDSAVANGPELIVEDTGLCTSFMLLDNIPSAHL
TKELIGFTWFMQMYQMTPPLPEGAVNRIVCMTNWASLGDEGRGLEVRLPP
PTDSSVHAYKTVLSRGYIDNAQFNPLALRSNVLLMLLQFTLSNLKINKSS
TFTSDVTTITSGRMIRAFEGRPELLALAYPGRAVLPTQTKNAQFLSTAIA
DRIGRLDRANLIGGEVSAMVECMELCDALTLHIRETYVMLLRSMHQDPTQ
IVQIVNECANNLLNSTIPISLRPTILCPWFASSEDLRLQQVMHLVNISSN
TAAALPLVEALSTLLRSVTPLVLDPTVLTNAITTISESTTQTISPISEIL
RLLQPMGNDYAAFWKCIASWAYNGLVTTVLSEDAFPDSSQSITHLPSMWK
CLFLTLAGPMTSDPHSPVKVFMALANLLAQPEPIAIGVPGMHQTTPASQF
SHPGVWPPGFLNPQLINPQQAPLLRAFAEHIRANWPQPSEFGYGSTLQGS
ANLFIPPNRMVYPWPNQPLPRLTVAPTYDSAMSNWISTTIAFFIRVVNSV
NMTATVNDLTRRTMTGVMTAMRQVKTMTPFYIQHMCPTELSVLASVTVTP
PFQVPFTRLVQNDVITNVLVARVDPAQRGDAAVDIRATHATFAAALPVDP
AAIVVAMLCGQTETNLIPSHHYGKAFAPLFASNAMFTRNQRAVITREAFV
CARSAVAQCQDAGFLVPRPLDALRQFDVTSAAAAEIMHAVNDAFKTAFDL
DGALLDGLALYGDPRIADLSAAYLQYGGNVVREHVPPGPSHIHRTLQQVE
STFMAEMNLFNVARGNLYLVQTATNGNWSPMAPVAAPPFVRGGPNVRVVG
RFGTIVPRPDGLEPQLIDDGNVPRDIAGDWVYPSDVLQVSVAVFCDYVWP
MVKAGRTRVLVELGHYVYTLHYYDPQISLDEAPILEEWLSKINPAGIPPV
PFCIPIPQVYPCITARRVHYAFTSENNNDSLFSTNAASIDTAFGENAAVS
PLRWPGLVDPNYRVGTNDLPNRITLYNSLYRYNFTYPTLDGIMYVRSA
3D structure
PDB8fjl Asymmetric reconstruction of the aquareovirus core at near-atomic resolution and mechanism of transcription initiation.
ChainK
Resolution3.27 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN K C119 C122 H135 H140 C4 C7 H20 H25
Gene Ontology
Molecular Function
GO:0003724 RNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding
Biological Process
GO:0006370 7-methylguanosine mRNA capping
Cellular Component
GO:0039616 T=2 icosahedral viral capsid
GO:0039625 viral inner capsid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fjl, PDBe:8fjl, PDBj:8fjl
PDBsum8fjl
PubMed36856784
UniProtQ8JU60|CAPSD_AQRVC Major inner capsid protein VP3 (Gene Name=S3)

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