Structure of PDB 7nkg Chain K

Receptor sequence
>7nkgK (length=432) Species: 1122233 (Methermicoccus shengliensis DSM 18856) [Search protein sequence]
SDKVDIYSDRGKLLASDVDIMDLAPTRNRAIRTIIHDTKRTAAVNLGGIE
KALANGRIGKVKKIPGKEMKLDIVANAERLAERVKELVQVNEGDDTTVEV
LAGGKFLKVQVPSARLESGAEYVSSITASAAAITQAIIELFDVGIFDACM
VKAAVWGDYPQTIGLNGGNVSSILEIPQKDEGLGFTLRNIMANHIAAITQ
RNAMNAAALSSILEQCGEFEMGNAIGMFERHQLLGLAYQGLNANNIVYET
VKEQGKSGTIGTVVHSIVERALEDGVISVDKVAPSGYKFYKANDVMLWNA
YAAAGSLAATMVNCGAARAAQCVSSTLLYFNDLLEKETGLPGCDYGKVQG
TAVGFSFFSHSIYGGGGPGVFNGNHIVTRHSRGFAIPCVAAAVALDAGTQ
MFSPEMTSAVVGTVYGSIPEFREPIKTVAASL
3D structure
PDB7nkg Structural Insights into the Methane-Generating Enzyme from a Methoxydotrophic Methanogen Reveal a Restrained Gallery of Post-Translational Modifications.
ChainK
Resolution1.6 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TP7 K F358 F359 Y364 G366 H376 F357 F358 Y363 G365 H375
BS02 F43 K S362 I363 Y364 S361 I362 Y363
BS03 COM K F358 Y364 F357 Y363
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 07:36:18 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7nkg', asym_id = 'K', title = 'Structural Insights into the Methane-Generating ...ned Gallery of Post-Translational Modifications. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7nkg', asym_id='K', title='Structural Insights into the Methane-Generating ...ned Gallery of Post-Translational Modifications. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0015948,0050524', uniprot = '', pdbid = '7nkg', asym_id = 'K'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0015948,0050524', uniprot='', pdbid='7nkg', asym_id='K')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>