Structure of PDB 7afi Chain K

Receptor sequence
>7afiK (length=116) Species: 562 (Escherichia coli) [Search protein sequence]
KQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAA
QVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDV
TPIPHNGCRPPKKRRV
3D structure
PDB7afi A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
ChainK
Resolution3.53 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna K H24 N28 N29 T33 Q38 G39 N40 A41 W44 T46 G48 R53 G54 P117 H118 N119 G120 C121 R122 P124 K125 R127 R128 V129 H11 N15 N16 T20 Q25 G26 N27 A28 W31 T33 G35 R40 G41 P104 H105 N106 G107 C108 R109 P111 K112 R114 R115 V116
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:7afi, PDBe:7afi, PDBj:7afi
PDBsum7afi
PubMed34088665
UniProtP0A7R9|RS11_ECOLI Small ribosomal subunit protein uS11 (Gene Name=rpsK)

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