Structure of PDB 4w2e Chain K

Receptor sequence
>4w2eK (length=139) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDA
IVPVEITIYADRSFTFVTKTPPASYLIRKAAGLEKGAHKPGREKVGRITW
EQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVEVVG
3D structure
PDB4w2e Crystal structure of elongation factor 4 bound to a clockwise ratcheted ribosome.
ChainK
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna K Q11 P73 S75 K86 G87 H89 K90 P91 L115 T117 M126 G129 R132 S133 M134 Q10 P72 S74 K85 G86 H88 K89 P90 L114 T116 M125 G128 R131 S132 M133
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:4w2e, PDBe:4w2e, PDBj:4w2e
PDBsum4w2e
PubMed25104389
UniProtQ5SLP6|RL11_THET8 Large ribosomal subunit protein uL11 (Gene Name=rplK)

[Back to BioLiP]