Structure of PDB 3gnd Chain K

Receptor sequence
>3gndK (length=276) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
GKDFRTDQPQKNIPFTLKGCGALDWGMQSRLSRIFNPKTGKTVMLAFDHG
YFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNRPVVLRAS
GANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQL
VDAGMKVGMPTMAVTGVVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFER
IVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPV
AMMKAVQAVVHHNETADRAYELYLSE
3D structure
PDB3gnd The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
ChainK
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.1.245: 3-hydroxy-5-phosphooxypentane-2,4-dione thiolase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 5RP K D57 H58 Y60 K203 G226 G227 D251 M252 G253 R254 D48 H49 Y51 K190 G213 G214 D238 M239 G240 R241
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004332 fructose-bisphosphate aldolase activity
GO:0016740 transferase activity
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups
GO:0016829 lyase activity
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:3gnd, PDBe:3gnd, PDBj:3gnd
PDBsum3gnd
PubMed19714241
UniProtP76143|LSRF_ECOLI 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase (Gene Name=lsrF)

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