Structure of PDB 1mt1 Chain K

Receptor sequence
>1mt1K (length=45) Species: 2190 (Methanocaldococcus jannaschii) [Search protein sequence]
LHAYFKLPNTVSLVAGSSEGETPLNAFDGALLNAGIGNVNLIRIS
3D structure
PDB1mt1 Pyruvoyl-Dependent Arginine Decarboxylase from Methanococcus jannaschii: Crystal Structures of the Self-Cleaved and S53A Proenzyme Forms
ChainK
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) N47 S52
Catalytic site (residue number reindexed from 1) N40 S45
Enzyme Commision number 4.1.1.19: arginine decarboxylase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 AG2 K L31 D35 L38 G44 L24 D28 L31 G37
Gene Ontology
Molecular Function
GO:0008792 arginine decarboxylase activity
GO:0016831 carboxy-lyase activity
Biological Process
GO:0006520 amino acid metabolic process
GO:0006527 arginine catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:1mt1, PDBe:1mt1, PDBj:1mt1
PDBsum1mt1
PubMed12623016
UniProtQ57764|PDAD_METJA Pyruvoyl-dependent arginine decarboxylase (Gene Name=pdaD)

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