Structure of PDB 1jzx Chain K

Receptor sequence
>1jzxK (length=197) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
AQINVIGQNGGRTIELPLPEVNSGVLHEVVTWQLASRRRGTASTRTRAQV
SKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQ
LGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLV
TDDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEE
3D structure
PDB1jzx Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
ChainK
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna K T54 G63 N66 H69 F77 P86 P96 R159 L170 G174 T53 G62 N65 H68 F76 P85 P95 R158 L169 G173
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1jzx, PDBe:1jzx, PDBj:1jzx
PDBsum1jzx
PubMed11677599
UniProtQ9RXK1|RL4_DEIRA Large ribosomal subunit protein uL4 (Gene Name=rplD)

[Back to BioLiP]