Structure of PDB 7ajt Chain JN

Receptor sequence
>7ajtJN (length=186) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
KTQPKVIRGPSDVYVPPSKKTQKLLRSNLQNDLELQQFLRESHLLSAFNN
IVYQDDQVIGKARSRTLEMRLNRLSRVNGHQDKINKLEKVPMHIRRGMID
KHVKRIKKYEQEAAEGGIVLSKVKKGQFRKIESTYKKDIERRIGGSIKAR
DKEKATKRERGLKISSVGRSTRNGLIVSKRDIARIS
3D structure
PDB7ajt Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome.
ChainJN
Resolution4.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna JN A167 N170 K205 R209 K233 I238 G241 K280 K281 R286 A47 N50 K61 R65 K89 I94 G97 K136 K137 R142
BS02 rna JN L231 M236 R239 K269 K292 R294 K298 K301 R302 R304 G305 K307 T315 R316 L87 M92 R95 K125 K148 R150 K154 K157 R158 R160 G161 K163 T171 R172
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:7ajt, PDBe:7ajt, PDBj:7ajt
PDBsum7ajt
PubMed33326748
UniProtP40546|FAF1_YEAST Protein FAF1 (Gene Name=FAF1)

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