Structure of PDB 8s8j Chain J

Receptor sequence

>8s8jJ (length=182) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

PRAPRTYSKTYSTPKRPYESARLDAELKLAGEYGLKNKREIYRISFQLSK
IRRAARDLLTRDEKDPKRLFEGNALIRRLVRIGVLSEDKKKLDYVLALKV
EDFLERRLQTQVYKLGLAKSVHHARVLISQRHIAVGKQIVNIPSFMVRLE
SEKHIDFARTSPFGGARPGRVARKRAAAAGGE

3D structure

PDB

8s8j Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

4.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	J	P2 R3 P5 R6 T7 Y8 S9 K10 T11 T14 K16 R17 P18 Y19 K37 K39 R40 E41 R44 F71 E72 A75 L76 R78 R82 K120 S121 H124 Q131 R132 H133 Q139 V141 N142 I143 P144 F146 R149 P163 R168 P169 G170 R171 V172 A173 K175 R176	P1 R2 P4 R5 T6 Y7 S8 K9 T10 T13 K15 R16 P17 Y18 K36 K38 R39 E40 R43 F70 E71 A74 L75 R77 R81 K119 S120 H123 Q130 R131 H132 Q138 V140 N141 I142 P143 F145 R148 P162 R167 P168 G169 R170 V171 A172 K174 R175

External links

PDB	RCSB:8s8j, PDBe:8s8j, PDBj:8s8j
PDBsum	8s8j
PubMed	39193907
UniProt	Q6CM18

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