Structure of PDB 8r05 Chain J

Receptor sequence
>8r05J (length=191) Species: 2218628 (Photorhabdus laumondii) [Search protein sequence]
LVPMVVEQTTRGERSYDIYSRLLKERIIFLTGQVEDHMANLVAAQMLFLE
AENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF
LLTAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKSRMNE
LMAKHTGRPIEEIAKDTERDRFLSADEAVEYGLVDKIFTHR
3D structure
PDB8r05 Structure of Staphylococcus aureus ClpP Bound to the Covalent Active Site Inhibitor Cystargolide A.
ChainJ
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.4.21.92: endopeptidase Clp.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 VSZ J G81 G82 I84 S111 M112 H136 P138 L139 I156 V159 G66 G67 I69 S96 M97 H121 P123 L124 I141 V144
Gene Ontology
Molecular Function
GO:0004176 ATP-dependent peptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
GO:0051117 ATPase binding
Biological Process
GO:0006508 proteolysis
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins
Cellular Component
GO:0005737 cytoplasm
GO:0009368 endopeptidase Clp complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8r05, PDBe:8r05, PDBj:8r05
PDBsum8r05
PubMed38029352
UniProtQ7N0L3|CLPP_PHOLL ATP-dependent Clp protease proteolytic subunit (Gene Name=clpP)

[Back to BioLiP]