Structure of PDB 8p0j Chain J

Receptor sequence
>8p0jJ (length=61) Species: 10245 (Vaccinia virus) [Search protein sequence]
VFQLVCSTCGKDISHERYKLIIRKKSLKDVLVSVKNECCRLKLSTQIEPQ
RNLTVQPLLDI
3D structure
PDB8p0j Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target)
ChainJ
Resolution2.39 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN J C7 C39 C40 C6 C38 C39
Gene Ontology
Molecular Function
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0034062 5'-3' RNA polymerase activity
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8p0j, PDBe:8p0j, PDBj:8p0j
PDBsum8p0j
PubMed
UniProtP68315|RP07_VACCC DNA-directed RNA polymerase 7 kDa subunit (Gene Name=OPG090)

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