Structure of PDB 8dck Chain J

Receptor sequence
>8dckJ (length=570) Species: 199310 (Escherichia coli CFT073) [Search protein sequence]
KFDFTWFIPAIIKYRKIFIETLVVSVFLQLFALITPLFFQVVMDKVLVHR
GFSTLNVITVALSVVVVFEIILSGLRTYIFAHSTSRIDVELGAKLFRHLL
ALPISYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVM
WYYSPKLTLVILFSLPCYAAWSVFISPILRRRLDDKFSRNADNQSFLVES
VTAINTIKAMAVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQK
TVMIINLWLGAHLVISGDLSIGQLIAFNMLAGQIVAPVIRLAQIWQDFQQ
VGISVTRLGDVLNSPTESYHGKLALPEINGNITFRNIRFRYKPDSPVILD
NINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALA
DPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHD
FISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSAL
DYESEHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGK
HKELLSEPESLYSYLYQLQS
3D structure
PDB8dck The hemolysin A secretion system is a multi-engine pump containing three ABC transporters.
ChainJ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP J G605 S607 G609 Q610 G469 S471 G473 Q474
BS02 ATP J Y477 S504 G505 G507 K508 S509 T510 Q550 Y341 S368 G369 G371 K372 S373 T374 Q414
BS03 MG J S509 Q550 S373 Q414
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0008233 peptidase activity
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0034040 ATPase-coupled lipid transmembrane transporter activity
GO:0140359 ABC-type transporter activity
Biological Process
GO:0006508 proteolysis
GO:0006869 lipid transport
GO:0030253 protein secretion by the type I secretion system
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030256 type I protein secretion system complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dck, PDBe:8dck, PDBj:8dck
PDBsum8dck
PubMed36055198
UniProtQ8FDZ8|HLYB_ECOL6 Alpha-hemolysin translocation ATP-binding protein HlyB (Gene Name=hlyB)

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