Structure of PDB 7psx Chain J

Receptor sequence
>7psxJ (length=58) Species: 9606 (Homo sapiens) [Search protein sequence]
KKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNR
RVKEKKVL
3D structure
PDB7psx Structure of HOXB13 bound to hydroxymethylated DNA
ChainJ
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna J R220 Y223 R258 Q259 I262 N266 K270 R3 Y6 R41 Q42 I45 N49 K53
BS02 dna J R220 P222 F240 K243 R246 Q265 R268 K272 R3 P5 F23 K26 R29 Q48 R51 K55
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7psx, PDBe:7psx, PDBj:7psx
PDBsum7psx
PubMed
UniProtQ92826|HXB13_HUMAN Homeobox protein Hox-B13 (Gene Name=HOXB13)

[Back to BioLiP]