Structure of PDB 7pbe Chain J

Receptor sequence

>7pbeJ (length=242) Species: 9606 (Homo sapiens) [Search protein sequence]

TGVSQDPRHKITKRGQNVTFRCDPISEHNRLYWYRQTLGQGPEFLTYFQN
EAQLEKSRLLSDRFSAERPKGSFSTLEIQRTEQGDSAMYLCASSSANSGE
LFFGEGSRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP
DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ
DPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD

3D structure

PDB

7pbe Emergence of immune escape at dominant SARS-CoV-2 killer T cell epitope.

Chain

Resolution

3.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	J	N30 R31 Q50 A97 N98	N29 R30 Q49 A96 N97

External links

PDB	RCSB:7pbe, PDBe:7pbe, PDBj:7pbe
PDBsum	7pbe
PubMed	35931021

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