Structure of PDB 6vqo Chain J

Receptor sequence

>6vqoJ (length=241) Species: 9606 (Homo sapiens) [Search protein sequence]

AQVTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMN
VEVTDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYFCASSIQQGADT
QYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP
DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ
NPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA

3D structure

PDB

6vqo Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.

Chain

Resolution

3.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	J	Q96 Q97 A99 D100	Q95 Q96 A98 D99

External links

PDB	RCSB:6vqo, PDBe:6vqo, PDBj:6vqo
PDBsum	6vqo
PubMed	32518267

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