Structure of PDB 6mck Chain J

Receptor sequence
>6mckJ (length=509) Species: 9606 (Homo sapiens) [Search protein sequence]
RKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA
NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI
APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR
FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGA
DLAALCSEAALQAIRVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDS
IAKARAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD
QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI
CQRACKLAIRESIESEIRRERERQTEIRRDHFEEAMRFARRSVSDNDIRK
YEMFAQTLQ
3D structure
PDB6mck Structural Basis of p97 Inhibition by the Site-Selective Anticancer Compound CB-5083.
ChainJ
Resolution3.77 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.6: vesicle-fusing ATPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 JDP J V474 D478 I479 L482 C522 L526 S652 I656 A659 R662 G684 A685 T688 V243 D247 I248 L251 C291 L295 S412 I416 A419 R422 G444 A445 T448 BindingDB: IC50=1030nM,Ki=26nM
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:6mck, PDBe:6mck, PDBj:6mck
PDBsum6mck
PubMed30591537
UniProtP55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase (Gene Name=VCP)

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